Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ddx54Q8K4L0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx54Q8K4L0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx54Q8K4L0 Gm5712-201ENSMUST00000199748 1043 ntBASIC23.21■■□□□ 1.31
Ddx54Q8K4L0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx54Q8K4L0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx54Q8K4L0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx54Q8K4L0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx54Q8K4L0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx54Q8K4L0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx54Q8K4L0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Gm37025-201ENSMUST00000195159 829 ntBASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
Ddx54Q8K4L0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC23.18■■□□□ 1.3
Ddx54Q8K4L0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx54Q8K4L0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx54Q8K4L0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Ddx54Q8K4L0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Gm43073-201ENSMUST00000198200 1189 ntBASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 AC124569.2-201ENSMUST00000225998 818 ntBASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx54Q8K4L0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
Ddx54Q8K4L0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx54Q8K4L0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx54Q8K4L0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ddx54Q8K4L0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC23.16■■□□□ 1.3
Ddx54Q8K4L0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx54Q8K4L0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx54Q8K4L0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx54Q8K4L0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx54Q8K4L0 Rncr4-201ENSMUST00000194541 2234 ntBASIC23.14■■□□□ 1.3
Ddx54Q8K4L0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ddx54Q8K4L0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC23.14■■□□□ 1.3
Ddx54Q8K4L0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ddx54Q8K4L0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Ddx54Q8K4L0 Actl10-202ENSMUST00000226583 1501 ntBASIC23.14■■□□□ 1.3
Ddx54Q8K4L0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ddx54Q8K4L0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ddx54Q8K4L0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx54Q8K4L0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx54Q8K4L0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx54Q8K4L0 Gm12895-201ENSMUST00000122214 226 ntBASIC23.14■■□□□ 1.29
Ddx54Q8K4L0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx54Q8K4L0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC23.14■■□□□ 1.29
Ddx54Q8K4L0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx54Q8K4L0 Gm18688-201ENSMUST00000204695 1859 ntBASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms