Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.56■■□□□ 1.04
Col23a1Q8K4G2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col23a1Q8K4G2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col23a1Q8K4G2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Col23a1Q8K4G2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC21.56■■□□□ 1.04
Col23a1Q8K4G2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Col23a1Q8K4G2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.56■■□□□ 1.04
Col23a1Q8K4G2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Col23a1Q8K4G2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col23a1Q8K4G2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col23a1Q8K4G2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col23a1Q8K4G2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.54■■□□□ 1.04
Col23a1Q8K4G2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.54■■□□□ 1.04
Col23a1Q8K4G2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.54■■□□□ 1.04
Col23a1Q8K4G2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.54■■□□□ 1.04
Col23a1Q8K4G2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col23a1Q8K4G2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col23a1Q8K4G2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Col23a1Q8K4G2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Gm18195-201ENSMUST00000207604 706 ntBASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col23a1Q8K4G2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col23a1Q8K4G2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col23a1Q8K4G2 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.52■■□□□ 1.04
Col23a1Q8K4G2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Col23a1Q8K4G2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col23a1Q8K4G2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Col23a1Q8K4G2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col23a1Q8K4G2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.52■■□□□ 1.04
Col23a1Q8K4G2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col23a1Q8K4G2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Gm10052-201ENSMUST00000168019 960 ntBASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Gm29791-202ENSMUST00000207888 369 ntBASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Gm7729-201ENSMUST00000050143 801 ntBASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col23a1Q8K4G2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col23a1Q8K4G2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col23a1Q8K4G2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col23a1Q8K4G2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms