Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cnot3Q8K0V4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.67■□□□□ 0.26
Cnot3Q8K0V4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cnot3Q8K0V4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cnot3Q8K0V4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cnot3Q8K0V4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.63■□□□□ 0.25
Cnot3Q8K0V4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cnot3Q8K0V4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms