Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm9731-201ENSMUST00000209480 747 ntBASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4rl1Q8K0S5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm28033-201ENSMUST00000184224 96 ntBASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn4rl1Q8K0S5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm37025-201ENSMUST00000195159 829 ntBASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm17808-201ENSMUST00000200859 894 ntBASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtn4rl1Q8K0S5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rtn4rl1Q8K0S5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Notumos-201ENSMUST00000151998 2659 ntBASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtn4rl1Q8K0S5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtn4rl1Q8K0S5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms