Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps50Q8CI71 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps50Q8CI71 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Rab3c-203ENSMUST00000224180 967 ntBASIC17.37■□□□□ 0.37
Vps50Q8CI71 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.37■□□□□ 0.37
Vps50Q8CI71 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps50Q8CI71 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps50Q8CI71 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps50Q8CI71 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps50Q8CI71 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps50Q8CI71 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Vps50Q8CI71 Gm8520-201ENSMUST00000186517 868 ntBASIC17.36■□□□□ 0.37
Vps50Q8CI71 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vps50Q8CI71 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.36■□□□□ 0.37
Vps50Q8CI71 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps50Q8CI71 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps50Q8CI71 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps50Q8CI71 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps50Q8CI71 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps50Q8CI71 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.35■□□□□ 0.37
Vps50Q8CI71 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps50Q8CI71 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps50Q8CI71 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Vps50Q8CI71 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps50Q8CI71 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps50Q8CI71 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.34■□□□□ 0.37
Vps50Q8CI71 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps50Q8CI71 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.34■□□□□ 0.37
Vps50Q8CI71 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.34■□□□□ 0.37
Vps50Q8CI71 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.34■□□□□ 0.37
Vps50Q8CI71 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps50Q8CI71 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Vps50Q8CI71 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps50Q8CI71 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps50Q8CI71 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps50Q8CI71 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps50Q8CI71 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps50Q8CI71 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.33■□□□□ 0.37
Vps50Q8CI71 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps50Q8CI71 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.33■□□□□ 0.37
Vps50Q8CI71 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.33■□□□□ 0.36
Vps50Q8CI71 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.33■□□□□ 0.36
Vps50Q8CI71 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vps50Q8CI71 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vps50Q8CI71 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps50Q8CI71 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps50Q8CI71 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.33■□□□□ 0.36
Vps50Q8CI71 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps50Q8CI71 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps50Q8CI71 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.32■□□□□ 0.36
Vps50Q8CI71 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Vps50Q8CI71 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps50Q8CI71 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps50Q8CI71 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms