Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox30Q8CGW4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sox30Q8CGW4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox30Q8CGW4 Gm7291-201ENSMUST00000199147 382 ntBASIC19.39■□□□□ 0.69
Sox30Q8CGW4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox30Q8CGW4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox30Q8CGW4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sox30Q8CGW4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox30Q8CGW4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sox30Q8CGW4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox30Q8CGW4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox30Q8CGW4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox30Q8CGW4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Sox30Q8CGW4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox30Q8CGW4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox30Q8CGW4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox30Q8CGW4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Gm13401-201ENSMUST00000117074 291 ntBASIC19.36■□□□□ 0.69
Sox30Q8CGW4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox30Q8CGW4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Gm44549-201ENSMUST00000208351 577 ntBASIC19.35■□□□□ 0.69
Sox30Q8CGW4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sox30Q8CGW4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox30Q8CGW4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.34■□□□□ 0.69
Sox30Q8CGW4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox30Q8CGW4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox30Q8CGW4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox30Q8CGW4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sox30Q8CGW4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sox30Q8CGW4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Sox30Q8CGW4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sox30Q8CGW4 Gm7290-201ENSMUST00000104990 617 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Gm12918-201ENSMUST00000120234 636 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Gm15710-201ENSMUST00000121821 636 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Gm6211-202ENSMUST00000167849 925 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Gm5075-201ENSMUST00000196916 622 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 AV356131-201ENSMUST00000206201 750 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Gm18671-201ENSMUST00000214826 683 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Gm6365-201ENSMUST00000054711 744 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox30Q8CGW4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox30Q8CGW4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms