Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Flg-201ENSMUST00000050758 1488 ntBASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc38Q8CDN8 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.65■□□□□ 0.74
Ccdc38Q8CDN8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc38Q8CDN8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc38Q8CDN8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc38Q8CDN8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc38Q8CDN8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc38Q8CDN8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc38Q8CDN8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc38Q8CDN8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc38Q8CDN8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Gm15039-201ENSMUST00000118914 875 ntBASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc38Q8CDN8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc38Q8CDN8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc38Q8CDN8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms