Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.35■□□□□ 0.69
Prpf31Q8CCF0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Gm10517-202ENSMUST00000192970 758 ntBASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Timm23-208ENSMUST00000226683 750 ntBASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf31Q8CCF0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf31Q8CCF0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf31Q8CCF0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Prpf31Q8CCF0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf31Q8CCF0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf31Q8CCF0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Odf3b-204ENSMUST00000227834 930 ntBASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf31Q8CCF0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf31Q8CCF0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.31■□□□□ 0.68
Prpf31Q8CCF0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.3■□□□□ 0.68
Prpf31Q8CCF0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms