Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SynpoQ8CC35 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SynpoQ8CC35 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SynpoQ8CC35 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SynpoQ8CC35 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SynpoQ8CC35 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SynpoQ8CC35 Fst-202ENSMUST00000223640 2612 ntBASIC17.11■□□□□ 0.33
SynpoQ8CC35 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SynpoQ8CC35 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SynpoQ8CC35 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SynpoQ8CC35 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SynpoQ8CC35 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SynpoQ8CC35 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SynpoQ8CC35 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SynpoQ8CC35 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SynpoQ8CC35 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SynpoQ8CC35 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Gm2399-201ENSMUST00000104944 225 ntBASIC17.09■□□□□ 0.33
SynpoQ8CC35 Gm11249-201ENSMUST00000117071 859 ntBASIC17.09■□□□□ 0.33
SynpoQ8CC35 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.09■□□□□ 0.33
SynpoQ8CC35 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SynpoQ8CC35 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SynpoQ8CC35 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SynpoQ8CC35 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SynpoQ8CC35 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SynpoQ8CC35 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SynpoQ8CC35 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.08■□□□□ 0.32
SynpoQ8CC35 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SynpoQ8CC35 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.07■□□□□ 0.32
SynpoQ8CC35 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.07■□□□□ 0.32
SynpoQ8CC35 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SynpoQ8CC35 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Gm6576-201ENSMUST00000169678 883 ntBASIC17.06■□□□□ 0.32
SynpoQ8CC35 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.06■□□□□ 0.32
SynpoQ8CC35 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.06■□□□□ 0.32
SynpoQ8CC35 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SynpoQ8CC35 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SynpoQ8CC35 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms