Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa4Q8CA71 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa4Q8CA71 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.66■□□□□ 0.9
Shisa4Q8CA71 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa4Q8CA71 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa4Q8CA71 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.66■□□□□ 0.9
Shisa4Q8CA71 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shisa4Q8CA71 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Shisa4Q8CA71 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.65■□□□□ 0.9
Shisa4Q8CA71 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.65■□□□□ 0.9
Shisa4Q8CA71 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shisa4Q8CA71 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shisa4Q8CA71 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shisa4Q8CA71 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shisa4Q8CA71 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shisa4Q8CA71 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Shisa4Q8CA71 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shisa4Q8CA71 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Shisa4Q8CA71 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shisa4Q8CA71 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shisa4Q8CA71 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa4Q8CA71 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Shisa4Q8CA71 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Shisa4Q8CA71 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa4Q8CA71 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa4Q8CA71 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Shisa4Q8CA71 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.62■□□□□ 0.89
Shisa4Q8CA71 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Gm10418-201ENSMUST00000100943 576 ntBASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Gm21814-202ENSMUST00000203277 873 ntBASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa4Q8CA71 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.6■□□□□ 0.89
Shisa4Q8CA71 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.6■□□□□ 0.89
Shisa4Q8CA71 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.6■□□□□ 0.89
Shisa4Q8CA71 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Gm4974-201ENSMUST00000209974 875 ntBASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms