Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Reep4-203ENSMUST00000226563 1444 ntBASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Slc46a2Q8CA03 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc46a2Q8CA03 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc46a2Q8CA03 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Slc46a2Q8CA03 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc46a2Q8CA03 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc46a2Q8CA03 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc46a2Q8CA03 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.02■□□□□ 0.32
Slc46a2Q8CA03 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.02■□□□□ 0.32
Slc46a2Q8CA03 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.02■□□□□ 0.32
Slc46a2Q8CA03 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Slc46a2Q8CA03 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc46a2Q8CA03 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc46a2Q8CA03 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.02■□□□□ 0.31
Slc46a2Q8CA03 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.02■□□□□ 0.31
Slc46a2Q8CA03 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc46a2Q8CA03 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.02■□□□□ 0.31
Slc46a2Q8CA03 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc46a2Q8CA03 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc46a2Q8CA03 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Gm9988-201ENSMUST00000069786 435 ntBASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc46a2Q8CA03 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Slc46a2Q8CA03 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17■□□□□ 0.31
Slc46a2Q8CA03 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc46a2Q8CA03 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc46a2Q8CA03 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms