Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alx1Q8C8B0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Alx1Q8C8B0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Timm23-208ENSMUST00000226683 750 ntBASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alx1Q8C8B0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Gm8969-201ENSMUST00000199694 526 ntBASIC20.69■□□□□ 0.9
Alx1Q8C8B0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alx1Q8C8B0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Gm24841-201ENSMUST00000158676 357 ntBASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alx1Q8C8B0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.67■□□□□ 0.9
Alx1Q8C8B0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Gm3375-201ENSMUST00000203929 796 ntBASIC20.67■□□□□ 0.9
Alx1Q8C8B0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Alx1Q8C8B0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Alx1Q8C8B0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms