Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tsen54Q8C2A2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tsen54Q8C2A2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tsen54Q8C2A2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Tsen54Q8C2A2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tsen54Q8C2A2 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.83□□□□□ -0.03
Tsen54Q8C2A2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tsen54Q8C2A2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tsen54Q8C2A2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Gm27801-201ENSMUST00000184174 223 ntBASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tsen54Q8C2A2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Tsen54Q8C2A2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tsen54Q8C2A2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Gm18284-201ENSMUST00000172604 624 ntBASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms