Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Gm27463-201ENSMUST00000183569 57 ntBASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3rf2Q8BZT2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3rf2Q8BZT2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3rf2Q8BZT2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sh3rf2Q8BZT2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf2Q8BZT2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Sh3rf2Q8BZT2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf2Q8BZT2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf2Q8BZT2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sh3rf2Q8BZT2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sh3rf2Q8BZT2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sh3rf2Q8BZT2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Gm18959-201ENSMUST00000208954 655 ntBASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sh3rf2Q8BZT2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms