Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trerf1Q8BXJ2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Gm12527-201ENSMUST00000117967 564 ntBASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trerf1Q8BXJ2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trerf1Q8BXJ2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trerf1Q8BXJ2 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.58■□□□□ 0.57
Trerf1Q8BXJ2 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.58■□□□□ 0.57
Trerf1Q8BXJ2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trerf1Q8BXJ2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trerf1Q8BXJ2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 Gm22325-201ENSMUST00000158904 308 ntBASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.58■□□□□ 0.56
Trerf1Q8BXJ2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Gm10653-202ENSMUST00000139570 835 ntBASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Gm20049-201ENSMUST00000219950 730 ntBASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trerf1Q8BXJ2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trerf1Q8BXJ2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trerf1Q8BXJ2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms