Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf7Q8BTV2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf7Q8BTV2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cpsf7Q8BTV2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf7Q8BTV2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf7Q8BTV2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf7Q8BTV2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf7Q8BTV2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf7Q8BTV2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf7Q8BTV2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf7Q8BTV2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Gm42642-201ENSMUST00000200683 355 ntBASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.71■□□□□ 0.43
Cpsf7Q8BTV2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Cpsf7Q8BTV2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpsf7Q8BTV2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Gm26571-201ENSMUST00000181399 666 ntBASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.69■□□□□ 0.42
Cpsf7Q8BTV2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf7Q8BTV2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
Cpsf7Q8BTV2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cpsf7Q8BTV2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cpsf7Q8BTV2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cpsf7Q8BTV2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms