Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpne3Q8BT60 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne3Q8BT60 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne3Q8BT60 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cpne3Q8BT60 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne3Q8BT60 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Gm7291-201ENSMUST00000199147 382 ntBASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne3Q8BT60 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Gm10849-201ENSMUST00000100397 618 ntBASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne3Q8BT60 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms