Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cc2d1bQ8BRN9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Cc2d1bQ8BRN9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cc2d1bQ8BRN9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cc2d1bQ8BRN9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Gm38285-201ENSMUST00000192928 922 ntBASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.56■□□□□ 0.72
Cc2d1bQ8BRN9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cc2d1bQ8BRN9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Zfp783-201ENSMUST00000095946 670 ntBASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Flg-201ENSMUST00000050758 1488 ntBASIC19.54■□□□□ 0.72
Cc2d1bQ8BRN9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cc2d1bQ8BRN9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Idnk-204ENSMUST00000226010 1898 ntBASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Gm10602-201ENSMUST00000098239 609 ntBASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Cc2d1bQ8BRN9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Cc2d1bQ8BRN9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cc2d1bQ8BRN9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms