Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdkl3Q8BLF2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkl3Q8BLF2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkl3Q8BLF2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkl3Q8BLF2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkl3Q8BLF2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkl3Q8BLF2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkl3Q8BLF2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkl3Q8BLF2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkl3Q8BLF2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdkl3Q8BLF2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms