Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrsam1Q80ZI6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrsam1Q80ZI6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Lrsam1Q80ZI6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.22■□□□□ 0.67
Lrsam1Q80ZI6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrsam1Q80ZI6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrsam1Q80ZI6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrsam1Q80ZI6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrsam1Q80ZI6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrsam1Q80ZI6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrsam1Q80ZI6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Lrsam1Q80ZI6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrsam1Q80ZI6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.17■□□□□ 0.66
Lrsam1Q80ZI6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms