Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Gm28659-201ENSMUST00000188013 759 ntBASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.7■□□□□ 0.42
Tnrc18Q80WC3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tnrc18Q80WC3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Gm26039-201ENSMUST00000158152 144 ntBASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnrc18Q80WC3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Gm37722-201ENSMUST00000193757 208 ntBASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Mir770-201ENSMUST00000103252 94 ntBASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tnrc18Q80WC3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Gm37935-201ENSMUST00000192012 982 ntBASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnrc18Q80WC3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tnrc18Q80WC3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.64■□□□□ 0.42
Tnrc18Q80WC3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tnrc18Q80WC3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Tnrc18Q80WC3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnrc18Q80WC3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms