Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf40bQ80W14 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf40bQ80W14 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf40bQ80W14 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Prpf40bQ80W14 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf40bQ80W14 Gm14859-201ENSMUST00000117752 357 ntBASIC20.39■□□□□ 0.85
Prpf40bQ80W14 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Prpf40bQ80W14 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf40bQ80W14 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf40bQ80W14 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf40bQ80W14 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf40bQ80W14 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Prpf40bQ80W14 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf40bQ80W14 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Gm37292-201ENSMUST00000192062 758 ntBASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.38■□□□□ 0.85
Prpf40bQ80W14 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.38■□□□□ 0.85
Prpf40bQ80W14 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf40bQ80W14 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Gm12382-201ENSMUST00000122005 922 ntBASIC20.37■□□□□ 0.85
Prpf40bQ80W14 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf40bQ80W14 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf40bQ80W14 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.36■□□□□ 0.85
Prpf40bQ80W14 Gm15375-201ENSMUST00000119510 849 ntBASIC20.36■□□□□ 0.85
Prpf40bQ80W14 Gm18032-201ENSMUST00000222541 538 ntBASIC20.36■□□□□ 0.85
Prpf40bQ80W14 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf40bQ80W14 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf40bQ80W14 Zfp783-201ENSMUST00000095946 670 ntBASIC20.36■□□□□ 0.85
Prpf40bQ80W14 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf40bQ80W14 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prpf40bQ80W14 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms