Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp8Q80U87 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.74■□□□□ 0.43
Usp8Q80U87 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp8Q80U87 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp8Q80U87 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp8Q80U87 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Usp8Q80U87 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.74■□□□□ 0.43
Usp8Q80U87 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp8Q80U87 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Usp8Q80U87 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp8Q80U87 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp8Q80U87 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp8Q80U87 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Usp8Q80U87 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp8Q80U87 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Usp8Q80U87 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp8Q80U87 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp8Q80U87 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp8Q80U87 Gm8495-201ENSMUST00000188740 694 ntBASIC17.73■□□□□ 0.43
Usp8Q80U87 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp8Q80U87 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp8Q80U87 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.73■□□□□ 0.43
Usp8Q80U87 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp8Q80U87 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp8Q80U87 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp8Q80U87 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp8Q80U87 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp8Q80U87 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp8Q80U87 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.72■□□□□ 0.43
Usp8Q80U87 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp8Q80U87 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Usp8Q80U87 Gm42569-201ENSMUST00000200539 472 ntBASIC17.71■□□□□ 0.43
Usp8Q80U87 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp8Q80U87 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.71■□□□□ 0.43
Usp8Q80U87 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp8Q80U87 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.7■□□□□ 0.42
Usp8Q80U87 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp8Q80U87 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp8Q80U87 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp8Q80U87 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Usp8Q80U87 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp8Q80U87 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp8Q80U87 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp8Q80U87 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.69■□□□□ 0.42
Usp8Q80U87 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.69■□□□□ 0.42
Usp8Q80U87 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Usp8Q80U87 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.69■□□□□ 0.42
Usp8Q80U87 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.69■□□□□ 0.42
Usp8Q80U87 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.69■□□□□ 0.42
Usp8Q80U87 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.69■□□□□ 0.42
Usp8Q80U87 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp8Q80U87 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.69■□□□□ 0.42
Usp8Q80U87 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Usp8Q80U87 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms