Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf139Q7TMV1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.95■□□□□ 0.62
Rnf139Q7TMV1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf139Q7TMV1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf139Q7TMV1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf139Q7TMV1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rnf139Q7TMV1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.94■□□□□ 0.62
Rnf139Q7TMV1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf139Q7TMV1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.94■□□□□ 0.62
Rnf139Q7TMV1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf139Q7TMV1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf139Q7TMV1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Gm43183-201ENSMUST00000200632 547 ntBASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf139Q7TMV1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Gm6576-201ENSMUST00000169678 883 ntBASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Gm22240-201ENSMUST00000175225 82 ntBASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.92■□□□□ 0.62
Rnf139Q7TMV1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf139Q7TMV1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf139Q7TMV1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Rnf139Q7TMV1 Gm12382-201ENSMUST00000122005 922 ntBASIC18.91■□□□□ 0.62
Rnf139Q7TMV1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf139Q7TMV1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf139Q7TMV1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf139Q7TMV1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf139Q7TMV1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf139Q7TMV1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.9■□□□□ 0.62
Rnf139Q7TMV1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Rnf139Q7TMV1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf139Q7TMV1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf139Q7TMV1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf139Q7TMV1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf139Q7TMV1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf139Q7TMV1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.88■□□□□ 0.61
Rnf139Q7TMV1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf139Q7TMV1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf139Q7TMV1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rnf139Q7TMV1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms