Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Npc1l1Q6T3U4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.27■□□□□ 0.99
Npc1l1Q6T3U4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.27■□□□□ 0.99
Npc1l1Q6T3U4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Npc1l1Q6T3U4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Npc1l1Q6T3U4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Npc1l1Q6T3U4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Npc1l1Q6T3U4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Npc1l1Q6T3U4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Npc1l1Q6T3U4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Npc1l1Q6T3U4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Npc1l1Q6T3U4 Gm13401-201ENSMUST00000117074 291 ntBASIC21.26■□□□□ 0.99
Npc1l1Q6T3U4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.26■□□□□ 0.99
Npc1l1Q6T3U4 Idnk-204ENSMUST00000226010 1898 ntBASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Npc1l1Q6T3U4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Npc1l1Q6T3U4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Npc1l1Q6T3U4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Npc1l1Q6T3U4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 Gm10819-201ENSMUST00000099988 561 ntBASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Npc1l1Q6T3U4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Grk6-206ENSMUST00000224995 2971 ntBASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms