Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Gm11025-201ENSMUST00000140773 466 ntBASIC14.9□□□□□ -0.02
Rif1Q6PR54 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.9□□□□□ -0.02
Rif1Q6PR54 Mir5131-201ENSMUST00000175426 93 ntBASIC14.9□□□□□ -0.02
Rif1Q6PR54 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rif1Q6PR54 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.89□□□□□ -0.03
Rif1Q6PR54 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.89□□□□□ -0.03
Rif1Q6PR54 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rif1Q6PR54 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rif1Q6PR54 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.87□□□□□ -0.03
Rif1Q6PR54 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.87□□□□□ -0.03
Rif1Q6PR54 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rif1Q6PR54 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.86□□□□□ -0.03
Rif1Q6PR54 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Gm23547-201ENSMUST00000158210 271 ntBASIC14.85□□□□□ -0.03
Rif1Q6PR54 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rif1Q6PR54 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.85□□□□□ -0.03
Rif1Q6PR54 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rif1Q6PR54 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms