Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.78■□□□□ 0.28
Trim45Q6PFY8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim45Q6PFY8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.78■□□□□ 0.28
Trim45Q6PFY8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim45Q6PFY8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim45Q6PFY8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim45Q6PFY8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trim45Q6PFY8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim45Q6PFY8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim45Q6PFY8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim45Q6PFY8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trim45Q6PFY8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim45Q6PFY8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim45Q6PFY8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim45Q6PFY8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim45Q6PFY8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim45Q6PFY8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Gm5643-201ENSMUST00000117081 966 ntBASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim45Q6PFY8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim45Q6PFY8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Gm11249-201ENSMUST00000117071 859 ntBASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim45Q6PFY8 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.73■□□□□ 0.27
Trim45Q6PFY8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim45Q6PFY8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim45Q6PFY8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim45Q6PFY8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim45Q6PFY8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim45Q6PFY8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim45Q6PFY8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim45Q6PFY8 Gm22325-201ENSMUST00000158904 308 ntBASIC16.73■□□□□ 0.27
Trim45Q6PFY8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms