Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Gm10576-201ENSMUST00000191927 825 ntBASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Gm2213-201ENSMUST00000197485 688 ntBASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srsf1Q6PDM2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Gm18195-201ENSMUST00000207604 706 ntBASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srsf1Q6PDM2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.27■□□□□ 0.04
Srsf1Q6PDM2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srsf1Q6PDM2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srsf1Q6PDM2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srsf1Q6PDM2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srsf1Q6PDM2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.27■□□□□ 0.04
Srsf1Q6PDM2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Srsf1Q6PDM2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srsf1Q6PDM2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srsf1Q6PDM2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srsf1Q6PDM2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srsf1Q6PDM2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srsf1Q6PDM2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srsf1Q6PDM2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Srsf1Q6PDM2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Iqck-206ENSMUST00000208658 2891 ntBASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Gm10566-201ENSMUST00000086739 996 ntBASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Srsf1Q6PDM2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Mir770-201ENSMUST00000103252 94 ntBASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Srsf1Q6PDM2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srsf1Q6PDM2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Srsf1Q6PDM2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srsf1Q6PDM2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Srsf1Q6PDM2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srsf1Q6PDM2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srsf1Q6PDM2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srsf1Q6PDM2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Srsf1Q6PDM2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms