Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Mir2861-201ENSMUST00000175539 82 ntBASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Trmt13-210ENSMUST00000198454 880 ntBASIC19.57■□□□□ 0.72
Herc4Q6PAV2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herc4Q6PAV2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Gm13158-201ENSMUST00000122007 736 ntBASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Herc4Q6PAV2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Herc4Q6PAV2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herc4Q6PAV2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herc4Q6PAV2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herc4Q6PAV2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Herc4Q6PAV2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herc4Q6PAV2 Gm15375-201ENSMUST00000119510 849 ntBASIC19.54■□□□□ 0.72
Herc4Q6PAV2 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.54■□□□□ 0.72
Herc4Q6PAV2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.54■□□□□ 0.72
Herc4Q6PAV2 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.54■□□□□ 0.72
Herc4Q6PAV2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herc4Q6PAV2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Mir6349-201ENSMUST00000184059 97 ntBASIC19.53■□□□□ 0.72
Herc4Q6PAV2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.53■□□□□ 0.72
Herc4Q6PAV2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.52■□□□□ 0.72
Herc4Q6PAV2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.52■□□□□ 0.72
Herc4Q6PAV2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herc4Q6PAV2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms