Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smchd1Q6P5D8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 Gm6659-201ENSMUST00000174752 547 ntBASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smchd1Q6P5D8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Gm29791-202ENSMUST00000207888 369 ntBASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smchd1Q6P5D8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smchd1Q6P5D8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smchd1Q6P5D8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Gm18032-201ENSMUST00000222541 538 ntBASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smchd1Q6P5D8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Gm18959-201ENSMUST00000208954 655 ntBASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smchd1Q6P5D8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smchd1Q6P5D8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smchd1Q6P5D8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smchd1Q6P5D8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smchd1Q6P5D8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smchd1Q6P5D8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smchd1Q6P5D8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smchd1Q6P5D8 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.44■□□□□ 0.7
Smchd1Q6P5D8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms