Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac4Q6NZM9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac4Q6NZM9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Gm12527-201ENSMUST00000117967 564 ntBASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Gm11643-201ENSMUST00000119578 864 ntBASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Gm13158-201ENSMUST00000122007 736 ntBASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac4Q6NZM9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac4Q6NZM9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac4Q6NZM9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac4Q6NZM9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac4Q6NZM9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac4Q6NZM9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac4Q6NZM9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac4Q6NZM9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Gm37856-201ENSMUST00000191634 999 ntBASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms