Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Krt42Q6IFX2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Krt42Q6IFX2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.21■□□□□ 0.51
Krt42Q6IFX2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Krt42Q6IFX2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Krt42Q6IFX2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Krt42Q6IFX2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Krt42Q6IFX2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Krt42Q6IFX2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt42Q6IFX2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Mir7075-201ENSMUST00000184187 82 ntBASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt42Q6IFX2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt42Q6IFX2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Krt42Q6IFX2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt42Q6IFX2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt42Q6IFX2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt42Q6IFX2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.16■□□□□ 0.5
Krt42Q6IFX2 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms