Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga7Q6DD96 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhga7Q6DD96 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhga7Q6DD96 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Gm7290-201ENSMUST00000104990 617 ntBASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Gm12918-201ENSMUST00000120234 636 ntBASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Gm15710-201ENSMUST00000121821 636 ntBASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Gm5075-201ENSMUST00000196916 622 ntBASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Gm42569-201ENSMUST00000200539 472 ntBASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga7Q6DD96 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Gm6211-202ENSMUST00000167849 925 ntBASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga7Q6DD96 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga7Q6DD96 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhga7Q6DD96 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms