Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ltn1Q6A009 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ltn1Q6A009 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ltn1Q6A009 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ltn1Q6A009 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ltn1Q6A009 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ltn1Q6A009 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.06■□□□□ 0.96
Ltn1Q6A009 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ltn1Q6A009 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ltn1Q6A009 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Gm27357-201ENSMUST00000183754 135 ntBASIC21.05■□□□□ 0.96
Ltn1Q6A009 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ltn1Q6A009 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Ltn1Q6A009 Gm7461-201ENSMUST00000058918 827 ntBASIC21.05■□□□□ 0.96
Ltn1Q6A009 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ltn1Q6A009 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ltn1Q6A009 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ltn1Q6A009 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ltn1Q6A009 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ltn1Q6A009 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.03■□□□□ 0.96
Ltn1Q6A009 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ltn1Q6A009 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ltn1Q6A009 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ltn1Q6A009 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ltn1Q6A009 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.03■□□□□ 0.96
Ltn1Q6A009 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ltn1Q6A009 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ltn1Q6A009 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ltn1Q6A009 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.02■□□□□ 0.96
Ltn1Q6A009 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ltn1Q6A009 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.02■□□□□ 0.96
Ltn1Q6A009 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ltn1Q6A009 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ltn1Q6A009 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.02■□□□□ 0.95
Ltn1Q6A009 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ltn1Q6A009 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ltn1Q6A009 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ltn1Q6A009 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ltn1Q6A009 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21■□□□□ 0.95
Ltn1Q6A009 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ltn1Q6A009 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Ltn1Q6A009 Gm37722-201ENSMUST00000193757 208 ntBASIC21■□□□□ 0.95
Ltn1Q6A009 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ltn1Q6A009 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ltn1Q6A009 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ltn1Q6A009 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Ltn1Q6A009 Golph3-205ENSMUST00000228671 2842 ntBASIC21■□□□□ 0.95
Ltn1Q6A009 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Mir770-201ENSMUST00000103252 94 ntBASIC21■□□□□ 0.95
Ltn1Q6A009 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ltn1Q6A009 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ltn1Q6A009 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ltn1Q6A009 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ltn1Q6A009 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ltn1Q6A009 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ltn1Q6A009 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ltn1Q6A009 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ltn1Q6A009 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ltn1Q6A009 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms