Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn9aQ62205 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn9aQ62205 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Scn9aQ62205 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn9aQ62205 Gm6443-201ENSMUST00000203599 874 ntBASIC20.94■□□□□ 0.94
Scn9aQ62205 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn9aQ62205 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn9aQ62205 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.94■□□□□ 0.94
Scn9aQ62205 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn9aQ62205 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn9aQ62205 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.94■□□□□ 0.94
Scn9aQ62205 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn9aQ62205 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn9aQ62205 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn9aQ62205 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scn9aQ62205 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.93■□□□□ 0.94
Scn9aQ62205 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scn9aQ62205 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.93■□□□□ 0.94
Scn9aQ62205 Gm27742-201ENSMUST00000184667 60 ntBASIC20.93■□□□□ 0.94
Scn9aQ62205 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.93■□□□□ 0.94
Scn9aQ62205 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn9aQ62205 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn9aQ62205 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scn9aQ62205 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn9aQ62205 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scn9aQ62205 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scn9aQ62205 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Scn9aQ62205 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scn9aQ62205 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.92■□□□□ 0.94
Scn9aQ62205 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scn9aQ62205 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.92■□□□□ 0.94
Scn9aQ62205 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn9aQ62205 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn9aQ62205 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scn9aQ62205 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn9aQ62205 Mir770-201ENSMUST00000103252 94 ntBASIC20.92■□□□□ 0.94
Scn9aQ62205 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn9aQ62205 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Scn9aQ62205 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Scn9aQ62205 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Scn9aQ62205 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Scn9aQ62205 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Scn9aQ62205 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn9aQ62205 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scn9aQ62205 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn9aQ62205 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn9aQ62205 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.91■□□□□ 0.94
Scn9aQ62205 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn9aQ62205 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn9aQ62205 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Scn9aQ62205 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn9aQ62205 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn9aQ62205 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn9aQ62205 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Gm37722-201ENSMUST00000193757 208 ntBASIC20.9■□□□□ 0.94
Scn9aQ62205 Gm29791-202ENSMUST00000207888 369 ntBASIC20.9■□□□□ 0.94
Scn9aQ62205 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Scn9aQ62205 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Scn9aQ62205 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.9■□□□□ 0.94
Scn9aQ62205 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn9aQ62205 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scn9aQ62205 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn9aQ62205 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn9aQ62205 Birc2-201ENSMUST00000054878 378 ntBASIC20.89■□□□□ 0.93
Scn9aQ62205 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn9aQ62205 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Scn9aQ62205 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn9aQ62205 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn9aQ62205 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.88■□□□□ 0.93
Scn9aQ62205 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Scn9aQ62205 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.88■□□□□ 0.93
Scn9aQ62205 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.88■□□□□ 0.93
Scn9aQ62205 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Scn9aQ62205 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn9aQ62205 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.88■□□□□ 0.93
Scn9aQ62205 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn9aQ62205 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn9aQ62205 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn9aQ62205 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn9aQ62205 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn9aQ62205 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn9aQ62205 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn9aQ62205 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Scn9aQ62205 Olfr129-201ENSMUST00000122318 993 ntBASIC20.88■□□□□ 0.93
Scn9aQ62205 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn9aQ62205 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn9aQ62205 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn9aQ62205 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn9aQ62205 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn9aQ62205 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms