Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.67■□□□□ 0.26
VcanQ62059 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VcanQ62059 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VcanQ62059 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VcanQ62059 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VcanQ62059 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.66■□□□□ 0.26
VcanQ62059 Gm10566-201ENSMUST00000086739 996 ntBASIC16.66■□□□□ 0.26
VcanQ62059 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VcanQ62059 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VcanQ62059 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.65■□□□□ 0.26
VcanQ62059 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.65■□□□□ 0.26
VcanQ62059 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.65■□□□□ 0.26
VcanQ62059 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VcanQ62059 Gm7213-201ENSMUST00000215977 950 ntBASIC16.65■□□□□ 0.26
VcanQ62059 Rps4l-201ENSMUST00000071745 943 ntBASIC16.65■□□□□ 0.26
VcanQ62059 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VcanQ62059 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.64■□□□□ 0.26
VcanQ62059 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.64■□□□□ 0.26
VcanQ62059 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VcanQ62059 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VcanQ62059 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VcanQ62059 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VcanQ62059 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VcanQ62059 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VcanQ62059 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VcanQ62059 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VcanQ62059 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VcanQ62059 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VcanQ62059 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VcanQ62059 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.64■□□□□ 0.25
VcanQ62059 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VcanQ62059 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.64■□□□□ 0.25
VcanQ62059 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VcanQ62059 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VcanQ62059 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VcanQ62059 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
VcanQ62059 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
VcanQ62059 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.63■□□□□ 0.25
VcanQ62059 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.63■□□□□ 0.25
VcanQ62059 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.63■□□□□ 0.25
VcanQ62059 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.63■□□□□ 0.25
VcanQ62059 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.63■□□□□ 0.25
VcanQ62059 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VcanQ62059 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 Gm2756-201ENSMUST00000195851 400 ntBASIC16.63■□□□□ 0.25
VcanQ62059 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VcanQ62059 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VcanQ62059 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.62■□□□□ 0.25
VcanQ62059 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VcanQ62059 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.62■□□□□ 0.25
VcanQ62059 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VcanQ62059 Gm45328-201ENSMUST00000210942 917 ntBASIC16.62■□□□□ 0.25
VcanQ62059 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.62■□□□□ 0.25
VcanQ62059 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VcanQ62059 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VcanQ62059 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VcanQ62059 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VcanQ62059 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VcanQ62059 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.62■□□□□ 0.25
VcanQ62059 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.62■□□□□ 0.25
VcanQ62059 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VcanQ62059 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VcanQ62059 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VcanQ62059 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VcanQ62059 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms