Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rai1Q61818 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rai1Q61818 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rai1Q61818 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rai1Q61818 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rai1Q61818 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.11■□□□□ 0.33
Rai1Q61818 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rai1Q61818 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rai1Q61818 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.11■□□□□ 0.33
Rai1Q61818 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rai1Q61818 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.11■□□□□ 0.33
Rai1Q61818 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.1■□□□□ 0.33
Rai1Q61818 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Gm27704-201ENSMUST00000185094 107 ntBASIC17.1■□□□□ 0.33
Rai1Q61818 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.1■□□□□ 0.33
Rai1Q61818 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rai1Q61818 Gm10566-201ENSMUST00000086739 996 ntBASIC17.1■□□□□ 0.33
Rai1Q61818 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rai1Q61818 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rai1Q61818 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.09■□□□□ 0.33
Rai1Q61818 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rai1Q61818 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.09■□□□□ 0.33
Rai1Q61818 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.09■□□□□ 0.33
Rai1Q61818 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rai1Q61818 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rai1Q61818 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rai1Q61818 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rai1Q61818 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rai1Q61818 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rai1Q61818 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rai1Q61818 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rai1Q61818 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rai1Q61818 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
Rai1Q61818 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rai1Q61818 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rai1Q61818 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rai1Q61818 Gm7213-201ENSMUST00000215977 950 ntBASIC17.08■□□□□ 0.33
Rai1Q61818 Gm18669-201ENSMUST00000216049 778 ntBASIC17.08■□□□□ 0.33
Rai1Q61818 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rai1Q61818 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rai1Q61818 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rai1Q61818 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rai1Q61818 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rai1Q61818 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rai1Q61818 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rai1Q61818 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Rai1Q61818 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Gm27357-201ENSMUST00000183754 135 ntBASIC17.07■□□□□ 0.32
Rai1Q61818 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rai1Q61818 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Gm11950-201ENSMUST00000121615 838 ntBASIC17.07■□□□□ 0.32
Rai1Q61818 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.07■□□□□ 0.32
Rai1Q61818 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.07■□□□□ 0.32
Rai1Q61818 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rai1Q61818 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rai1Q61818 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.07■□□□□ 0.32
Rai1Q61818 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rai1Q61818 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms