Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cln3Q61124 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.48■□□□□ 0.71
Cln3Q61124 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cln3Q61124 Golph3-205ENSMUST00000228671 2842 ntBASIC19.47■□□□□ 0.71
Cln3Q61124 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cln3Q61124 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.47■□□□□ 0.71
Cln3Q61124 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.47■□□□□ 0.71
Cln3Q61124 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.47■□□□□ 0.71
Cln3Q61124 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cln3Q61124 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cln3Q61124 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cln3Q61124 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cln3Q61124 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cln3Q61124 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.46■□□□□ 0.71
Cln3Q61124 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cln3Q61124 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.46■□□□□ 0.71
Cln3Q61124 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.46■□□□□ 0.71
Cln3Q61124 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cln3Q61124 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.46■□□□□ 0.71
Cln3Q61124 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cln3Q61124 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cln3Q61124 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cln3Q61124 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cln3Q61124 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Cln3Q61124 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cln3Q61124 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cln3Q61124 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cln3Q61124 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.44■□□□□ 0.7
Cln3Q61124 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cln3Q61124 Mir1668-201ENSMUST00000184114 107 ntBASIC19.44■□□□□ 0.7
Cln3Q61124 Gm9731-201ENSMUST00000209480 747 ntBASIC19.44■□□□□ 0.7
Cln3Q61124 Il3ra-202ENSMUST00000223589 738 ntBASIC19.44■□□□□ 0.7
Cln3Q61124 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cln3Q61124 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cln3Q61124 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cln3Q61124 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Cln3Q61124 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.43■□□□□ 0.7
Cln3Q61124 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Gm27389-201ENSMUST00000183622 195 ntBASIC19.43■□□□□ 0.7
Cln3Q61124 Gm5587-201ENSMUST00000206270 674 ntBASIC19.43■□□□□ 0.7
Cln3Q61124 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln3Q61124 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cln3Q61124 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln3Q61124 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln3Q61124 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln3Q61124 Gm7213-201ENSMUST00000215977 950 ntBASIC19.42■□□□□ 0.7
Cln3Q61124 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cln3Q61124 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.42■□□□□ 0.7
Cln3Q61124 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln3Q61124 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln3Q61124 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln3Q61124 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln3Q61124 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cln3Q61124 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln3Q61124 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.41■□□□□ 0.7
Cln3Q61124 Fst-202ENSMUST00000223640 2612 ntBASIC19.41■□□□□ 0.7
Cln3Q61124 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln3Q61124 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln3Q61124 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln3Q61124 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.41■□□□□ 0.7
Cln3Q61124 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln3Q61124 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.41■□□□□ 0.7
Cln3Q61124 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln3Q61124 Gm27704-201ENSMUST00000185094 107 ntBASIC19.41■□□□□ 0.7
Cln3Q61124 Gm29518-201ENSMUST00000190858 372 ntBASIC19.41■□□□□ 0.7
Cln3Q61124 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cln3Q61124 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln3Q61124 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln3Q61124 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln3Q61124 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.41■□□□□ 0.7
Cln3Q61124 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms