Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sim2Q61079 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sim2Q61079 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sim2Q61079 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Sim2Q61079 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sim2Q61079 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.26■□□□□ 0.35
Sim2Q61079 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.26■□□□□ 0.35
Sim2Q61079 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sim2Q61079 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Sim2Q61079 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Sim2Q61079 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sim2Q61079 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.26■□□□□ 0.35
Sim2Q61079 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sim2Q61079 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Sim2Q61079 Gm11355-201ENSMUST00000121120 306 ntBASIC17.25■□□□□ 0.35
Sim2Q61079 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Mir3081-201ENSMUST00000175305 84 ntBASIC17.25■□□□□ 0.35
Sim2Q61079 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.25■□□□□ 0.35
Sim2Q61079 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Gm7213-201ENSMUST00000215977 950 ntBASIC17.25■□□□□ 0.35
Sim2Q61079 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Gm5867-201ENSMUST00000063197 592 ntBASIC17.25■□□□□ 0.35
Sim2Q61079 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sim2Q61079 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sim2Q61079 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sim2Q61079 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sim2Q61079 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sim2Q61079 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sim2Q61079 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.24■□□□□ 0.35
Sim2Q61079 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sim2Q61079 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Sim2Q61079 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sim2Q61079 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sim2Q61079 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sim2Q61079 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sim2Q61079 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sim2Q61079 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sim2Q61079 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sim2Q61079 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sim2Q61079 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sim2Q61079 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sim2Q61079 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sim2Q61079 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.23■□□□□ 0.35
Sim2Q61079 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sim2Q61079 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sim2Q61079 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sim2Q61079 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sim2Q61079 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sim2Q61079 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.23■□□□□ 0.35
Sim2Q61079 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sim2Q61079 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sim2Q61079 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Gm11950-201ENSMUST00000121615 838 ntBASIC17.22■□□□□ 0.35
Sim2Q61079 Gm24841-201ENSMUST00000158676 357 ntBASIC17.22■□□□□ 0.35
Sim2Q61079 Gm43514-201ENSMUST00000198852 424 ntBASIC17.22■□□□□ 0.35
Sim2Q61079 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.22■□□□□ 0.35
Sim2Q61079 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim2Q61079 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim2Q61079 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sim2Q61079 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sim2Q61079 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sim2Q61079 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sim2Q61079 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim2Q61079 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sim2Q61079 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sim2Q61079 Gm24589-201ENSMUST00000116692 94 ntBASIC17.21■□□□□ 0.35
Sim2Q61079 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.21■□□□□ 0.35
Sim2Q61079 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim2Q61079 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sim2Q61079 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.21■□□□□ 0.35
Sim2Q61079 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sim2Q61079 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sim2Q61079 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim2Q61079 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.21■□□□□ 0.35
Sim2Q61079 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Sim2Q61079 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sim2Q61079 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Sim2Q61079 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Sim2Q61079 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim2Q61079 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim2Q61079 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms