Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Foxd3Q61060 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Foxd3Q61060 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.23■□□□□ 0.19
Foxd3Q61060 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Gm8520-201ENSMUST00000186517 868 ntBASIC16.23■□□□□ 0.19
Foxd3Q61060 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Foxd3Q61060 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.23■□□□□ 0.19
Foxd3Q61060 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Foxd3Q61060 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxd3Q61060 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.22■□□□□ 0.19
Foxd3Q61060 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Foxd3Q61060 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Foxd3Q61060 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
Foxd3Q61060 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.21■□□□□ 0.19
Foxd3Q61060 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxd3Q61060 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Foxd3Q61060 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Foxd3Q61060 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxd3Q61060 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxd3Q61060 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Foxd3Q61060 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.21■□□□□ 0.19
Foxd3Q61060 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Foxd3Q61060 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxd3Q61060 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Foxd3Q61060 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.21■□□□□ 0.19
Foxd3Q61060 Gm5408-201ENSMUST00000197998 747 ntBASIC16.21■□□□□ 0.19
Foxd3Q61060 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxd3Q61060 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.21■□□□□ 0.19
Foxd3Q61060 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.21■□□□□ 0.19
Foxd3Q61060 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxd3Q61060 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Foxd3Q61060 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Foxd3Q61060 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxd3Q61060 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxd3Q61060 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Foxd3Q61060 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Foxd3Q61060 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.2■□□□□ 0.18
Foxd3Q61060 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Foxd3Q61060 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.2■□□□□ 0.18
Foxd3Q61060 Gm13836-201ENSMUST00000121159 501 ntBASIC16.2■□□□□ 0.18
Foxd3Q61060 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Foxd3Q61060 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Foxd3Q61060 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxd3Q61060 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxd3Q61060 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.19■□□□□ 0.18
Foxd3Q61060 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Foxd3Q61060 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Foxd3Q61060 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.19■□□□□ 0.18
Foxd3Q61060 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Foxd3Q61060 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.19■□□□□ 0.18
Foxd3Q61060 Gm6365-201ENSMUST00000054711 744 ntBASIC16.19■□□□□ 0.18
Foxd3Q61060 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.19■□□□□ 0.18
Foxd3Q61060 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Foxd3Q61060 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxd3Q61060 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxd3Q61060 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxd3Q61060 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.18■□□□□ 0.18
Foxd3Q61060 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Foxd3Q61060 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxd3Q61060 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Foxd3Q61060 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms