Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfaip3Q60769 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Gm10418-201ENSMUST00000100943 576 ntBASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfaip3Q60769 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfaip3Q60769 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfaip3Q60769 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfaip3Q60769 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfaip3Q60769 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Mir6982-201ENSMUST00000184354 68 ntBASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfaip3Q60769 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tnfaip3Q60769 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms