Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ClpbQ60649 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClpbQ60649 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClpbQ60649 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClpbQ60649 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.97■□□□□ 0.31
ClpbQ60649 Gm18666-201ENSMUST00000190039 958 ntBASIC16.97■□□□□ 0.31
ClpbQ60649 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.97■□□□□ 0.31
ClpbQ60649 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ClpbQ60649 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClpbQ60649 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.97■□□□□ 0.31
ClpbQ60649 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.97■□□□□ 0.31
ClpbQ60649 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClpbQ60649 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClpbQ60649 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClpbQ60649 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClpbQ60649 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClpbQ60649 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClpbQ60649 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ClpbQ60649 Gm11249-201ENSMUST00000117071 859 ntBASIC16.96■□□□□ 0.31
ClpbQ60649 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ClpbQ60649 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClpbQ60649 Gm10812-201ENSMUST00000099864 546 ntBASIC16.96■□□□□ 0.31
ClpbQ60649 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ClpbQ60649 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ClpbQ60649 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClpbQ60649 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
ClpbQ60649 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
ClpbQ60649 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ClpbQ60649 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ClpbQ60649 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
ClpbQ60649 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClpbQ60649 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClpbQ60649 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
ClpbQ60649 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClpbQ60649 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.95■□□□□ 0.3
ClpbQ60649 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ClpbQ60649 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ClpbQ60649 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.95■□□□□ 0.3
ClpbQ60649 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ClpbQ60649 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClpbQ60649 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClpbQ60649 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.95■□□□□ 0.3
ClpbQ60649 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClpbQ60649 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClpbQ60649 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ClpbQ60649 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ClpbQ60649 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.94■□□□□ 0.3
ClpbQ60649 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.94■□□□□ 0.3
ClpbQ60649 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.94■□□□□ 0.3
ClpbQ60649 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
ClpbQ60649 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClpbQ60649 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClpbQ60649 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClpbQ60649 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClpbQ60649 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ClpbQ60649 Gm5643-201ENSMUST00000117081 966 ntBASIC16.93■□□□□ 0.3
ClpbQ60649 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.93■□□□□ 0.3
ClpbQ60649 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.93■□□□□ 0.3
ClpbQ60649 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClpbQ60649 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ClpbQ60649 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.93■□□□□ 0.3
ClpbQ60649 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClpbQ60649 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.93■□□□□ 0.3
ClpbQ60649 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClpbQ60649 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClpbQ60649 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.93■□□□□ 0.3
ClpbQ60649 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClpbQ60649 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.92■□□□□ 0.3
ClpbQ60649 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Gm13158-201ENSMUST00000122007 736 ntBASIC16.92■□□□□ 0.3
ClpbQ60649 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.92■□□□□ 0.3
ClpbQ60649 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.92■□□□□ 0.3
ClpbQ60649 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ClpbQ60649 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ClpbQ60649 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClpbQ60649 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ClpbQ60649 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms