Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.91■□□□□ 0.3
Xrcc1Q60596 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.91■□□□□ 0.3
Xrcc1Q60596 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Xrcc1Q60596 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Xrcc1Q60596 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Xrcc1Q60596 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Xrcc1Q60596 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Xrcc1Q60596 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Xrcc1Q60596 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Xrcc1Q60596 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xrcc1Q60596 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.89■□□□□ 0.29
Xrcc1Q60596 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xrcc1Q60596 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.89■□□□□ 0.29
Xrcc1Q60596 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.89■□□□□ 0.29
Xrcc1Q60596 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xrcc1Q60596 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.88■□□□□ 0.29
Xrcc1Q60596 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Xrcc1Q60596 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.87■□□□□ 0.29
Xrcc1Q60596 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.87■□□□□ 0.29
Xrcc1Q60596 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.87■□□□□ 0.29
Xrcc1Q60596 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Gm11643-201ENSMUST00000119578 864 ntBASIC16.87■□□□□ 0.29
Xrcc1Q60596 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.87■□□□□ 0.29
Xrcc1Q60596 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Xrcc1Q60596 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.86■□□□□ 0.29
Xrcc1Q60596 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms