Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpn1lQ5XFR0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pabpn1lQ5XFR0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpn1lQ5XFR0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpn1lQ5XFR0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.74■□□□□ 0.43
Pabpn1lQ5XFR0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpn1lQ5XFR0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpn1lQ5XFR0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpn1lQ5XFR0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpn1lQ5XFR0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Gm43137-201ENSMUST00000198052 594 ntBASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Pabpn1lQ5XFR0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pabpn1lQ5XFR0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pabpn1lQ5XFR0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pabpn1lQ5XFR0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pabpn1lQ5XFR0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pabpn1lQ5XFR0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.68■□□□□ 0.42
Pabpn1lQ5XFR0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pabpn1lQ5XFR0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms