Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Gm27011-201ENSMUST00000182352 972 ntBASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna2d4Q5RJF7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Gm18666-201ENSMUST00000190039 958 ntBASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna2d4Q5RJF7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Gm10138-203ENSMUST00000206952 366 ntBASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna2d4Q5RJF7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cacna2d4Q5RJF7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna2d4Q5RJF7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna2d4Q5RJF7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms