Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav7d-4Q5R1H9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7d-4Q5R1H9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7d-4Q5R1H9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7d-4Q5R1H9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7d-4Q5R1H9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7d-4Q5R1H9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7d-4Q5R1H9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-4Q5R1H9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-4Q5R1H9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Dancr-204ENSMUST00000132389 2347 ntBASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms