Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-1Q5R1H8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav8d-1Q5R1H8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Gm42642-201ENSMUST00000200683 355 ntBASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-1Q5R1H8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-1Q5R1H8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-1Q5R1H8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms