Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-2Q5R1B6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav8d-2Q5R1B6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-2Q5R1B6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-2Q5R1B6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav8d-2Q5R1B6 Gm29791-202ENSMUST00000207888 369 ntBASIC17.27■□□□□ 0.36
Trav8d-2Q5R1B6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-2Q5R1B6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8d-2Q5R1B6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav8d-2Q5R1B6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav8d-2Q5R1B6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Gm6623-201ENSMUST00000173570 544 ntBASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trav8d-2Q5R1B6 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.25■□□□□ 0.35
Trav8d-2Q5R1B6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav8d-2Q5R1B6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8d-2Q5R1B6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav8d-2Q5R1B6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav8d-2Q5R1B6 Gm27742-201ENSMUST00000184667 60 ntBASIC17.25■□□□□ 0.35
Trav8d-2Q5R1B6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trav8d-2Q5R1B6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav8d-2Q5R1B6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8d-2Q5R1B6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Gm24589-201ENSMUST00000116692 94 ntBASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Mzt1-203ENSMUST00000227948 952 ntBASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8d-2Q5R1B6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Gm18115-201ENSMUST00000221209 621 ntBASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8d-2Q5R1B6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8d-2Q5R1B6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8d-2Q5R1B6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms