Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Gm22697-201ENSMUST00000175194 63 ntBASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rnf43Q5NCP0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rnf43Q5NCP0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18■□□□□ 0.47
Rnf43Q5NCP0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf43Q5NCP0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf43Q5NCP0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Gm16061-201ENSMUST00000122167 857 ntBASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.98■□□□□ 0.47
Rnf43Q5NCP0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Gm25016-201ENSMUST00000158399 131 ntBASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Ank2-226ENSMUST00000189368 339 ntBASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf43Q5NCP0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Rarb-207ENSMUST00000225921 2756 ntBASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Gm14859-201ENSMUST00000117752 357 ntBASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Gm9103-201ENSMUST00000119371 405 ntBASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf43Q5NCP0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rnf43Q5NCP0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms