Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.57■□□□□ 0.24
Prune2Q52KR3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Actl10-202ENSMUST00000226583 1501 ntBASIC16.57■□□□□ 0.24
Prune2Q52KR3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.57■□□□□ 0.24
Prune2Q52KR3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prune2Q52KR3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.56■□□□□ 0.24
Prune2Q52KR3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.56■□□□□ 0.24
Prune2Q52KR3 Gm11452-201ENSMUST00000122376 690 ntBASIC16.56■□□□□ 0.24
Prune2Q52KR3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prune2Q52KR3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prune2Q52KR3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.56■□□□□ 0.24
Prune2Q52KR3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prune2Q52KR3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.56■□□□□ 0.24
Prune2Q52KR3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prune2Q52KR3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Gm10418-201ENSMUST00000100943 576 ntBASIC16.55■□□□□ 0.24
Prune2Q52KR3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Prune2Q52KR3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Gm26039-201ENSMUST00000158152 144 ntBASIC16.55■□□□□ 0.24
Prune2Q52KR3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.55■□□□□ 0.24
Prune2Q52KR3 Gm4974-201ENSMUST00000209974 875 ntBASIC16.55■□□□□ 0.24
Prune2Q52KR3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Gm18195-201ENSMUST00000207604 706 ntBASIC16.55■□□□□ 0.24
Prune2Q52KR3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prune2Q52KR3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.54■□□□□ 0.24
Prune2Q52KR3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.54■□□□□ 0.24
Prune2Q52KR3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.54■□□□□ 0.24
Prune2Q52KR3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prune2Q52KR3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.53■□□□□ 0.24
Prune2Q52KR3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prune2Q52KR3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Mir770-201ENSMUST00000103252 94 ntBASIC16.52■□□□□ 0.24
Prune2Q52KR3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prune2Q52KR3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms